Visualize and annotate genomic coverage with ggplot2
🦀 Fqkit: A simple and cross-platform program for fastq file manipulation
HMM for annotating coding regions of DNA in S. cerevisiae chromosome III
This is one of my first python scripts for a simple web-based tool that will generate basic information from the query DNA sequence.
Bioinformatics library
Computes gc contents in prokaryotic genomes
Beginner-friendly Jupyter tool to compute GC% and sliding-window profiles for DNA sequences.
My solutions for rosalind problems
Analysis on 5'UTRs based on sequence.
Python-based bioinformatics project that performs DNA validation, DNA to mRNA transcription, mRNA to protein translation, GC content calculation, and restriction enzyme site detection.
A simple Streamlit app to calculate DNA GC content 🧬
Computational toolkit for DNA sequence analysis.
Sliding window program to compute the %GC in sequence of nucleotides.
[Python] Tool for calculating GC content of nucleotide sequences with optional sliding window analysis. Sequence input options include strings and the following file formats: FASTA, FASTA Nucleid Acid, GenBank, Aligned FASTA and ClustalW.
CLI tool to compute GC content, GC skew, and sliding window profiles from DNA sequences in FASTA format, with ASCII visualization.
Python tool to compute GC content for DNA sequences, export results to CSV, and visualize them through simple bar plots.
a Python program to calculate GC content from fasta file
Cuadernos de Jupyter para el curso completo de Bioinformática. Cubre desde el manejo básico de secuencias FASTA hasta genómica comparativa y ensamblaje de genomas. Cada cuaderno incluye teoría explicada paso a paso, implementación en Python desde cero y visualizaciones con matplotlib.
Tool for analyzing and visualizing GC content in DNA sequences with FASTA input and sliding window analysis
Python-based DNA Sequence Analyzer for validating DNA sequences, calculating GC content, generating reverse complements, reading FASTA files, and creating analysis reports.
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